mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9ii7v6kc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:42,864 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:43,698 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:43,870 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:05,311 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:05,516 - cnv_pipe.batch.run_model - INFO - Processing cluster 899 with 108 probes
2026-06-03 04:51:05,909 - cnv_pipe.batch.run_model.cluster899 - INFO - Child process started for cluster 899 with 108 probes
2026-06-03 04:53:21,858 - cnv_pipe.batch.run_model.cluster899 - INFO - Child process finished cluster 899. Wrote cluster_899_samples.csv and cluster_899_params.csv
2026-06-03 04:53:21,860 - cnv_pipe.batch.run_model - INFO - Cluster 899 finished in 136.34 seconds. Status: SUCCESS