File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/95a3e5698c61915e1ddb2e08a92680/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-86odw5k1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:33,872 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:34,885 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:35,104 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:00,455 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:52:00,560 - cnv_pipe.batch.run_model - INFO - Processing cluster 1166 with 104 probes
2026-06-03 04:52:01,009 - cnv_pipe.batch.run_model.cluster1166 - INFO - Child process started for cluster 1166 with 104 probes
2026-06-03 04:54:08,598 - cnv_pipe.batch.run_model.cluster1166 - INFO - Child process finished cluster 1166. Wrote cluster_1166_samples.csv and cluster_1166_params.csv
2026-06-03 04:54:08,599 - cnv_pipe.batch.run_model - INFO - Cluster 1166 finished in 128.04 seconds. Status: SUCCESS