mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gzv7560w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:58,226 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:59,133 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:59,326 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:23,591 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:23,683 - cnv_pipe.batch.run_model - INFO - Processing cluster 979 with 192 probes
2026-06-03 04:51:24,095 - cnv_pipe.batch.run_model.cluster979 - INFO - Child process started for cluster 979 with 192 probes
2026-06-03 04:54:54,693 - cnv_pipe.batch.run_model.cluster979 - INFO - Child process finished cluster 979. Wrote cluster_979_samples.csv and cluster_979_params.csv
2026-06-03 04:54:54,695 - cnv_pipe.batch.run_model - INFO - Cluster 979 finished in 211.01 seconds. Status: SUCCESS