mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rilaon6i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:48:05,921 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:48:06,836 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:48:07,024 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:48:31,199 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:48:31,457 - cnv_pipe.batch.run_model - INFO - Processing cluster 105 with 140 probes
2026-06-03 04:48:31,867 - cnv_pipe.batch.run_model.cluster105 - INFO - Child process started for cluster 105 with 140 probes
2026-06-03 04:51:28,823 - cnv_pipe.batch.run_model.cluster105 - INFO - Child process finished cluster 105. Wrote cluster_105_samples.csv and cluster_105_params.csv
2026-06-03 04:51:28,826 - cnv_pipe.batch.run_model - INFO - Cluster 105 finished in 177.37 seconds. Status: SUCCESS