mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-doxq3mht because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:15,697 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:16,599 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:16,807 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:39,619 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:39,707 - cnv_pipe.batch.run_model - INFO - Processing cluster 752 with 175 probes
2026-06-03 04:50:40,130 - cnv_pipe.batch.run_model.cluster752 - INFO - Child process started for cluster 752 with 175 probes
2026-06-03 04:53:58,151 - cnv_pipe.batch.run_model.cluster752 - INFO - Child process finished cluster 752. Wrote cluster_752_samples.csv and cluster_752_params.csv
2026-06-03 04:53:58,154 - cnv_pipe.batch.run_model - INFO - Cluster 752 finished in 198.45 seconds. Status: SUCCESS