mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-n9cymx5_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:51,975 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:53,247 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:53,537 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:27,970 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:28,235 - cnv_pipe.batch.run_model - INFO - Processing cluster 933 with 198 probes
2026-06-03 04:51:28,869 - cnv_pipe.batch.run_model.cluster933 - INFO - Child process started for cluster 933 with 198 probes
2026-06-03 04:56:21,374 - cnv_pipe.batch.run_model.cluster933 - INFO - Child process finished cluster 933. Wrote cluster_933_samples.csv and cluster_933_params.csv
2026-06-03 04:56:21,376 - cnv_pipe.batch.run_model - INFO - Cluster 933 finished in 293.14 seconds. Status: SUCCESS