mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1ky6941u because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:56,583 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:57,393 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:57,566 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:20,595 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:20,680 - cnv_pipe.batch.run_model - INFO - Processing cluster 976 with 102 probes
2026-06-03 04:51:21,097 - cnv_pipe.batch.run_model.cluster976 - INFO - Child process started for cluster 976 with 102 probes
2026-06-03 04:53:28,089 - cnv_pipe.batch.run_model.cluster976 - INFO - Child process finished cluster 976. Wrote cluster_976_samples.csv and cluster_976_params.csv
2026-06-03 04:53:28,091 - cnv_pipe.batch.run_model - INFO - Cluster 976 finished in 127.41 seconds. Status: SUCCESS