mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3isg1j0w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:42,426 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:43,214 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:43,383 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:04,658 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:04,864 - cnv_pipe.batch.run_model - INFO - Processing cluster 587 with 160 probes
2026-06-03 04:50:05,242 - cnv_pipe.batch.run_model.cluster587 - INFO - Child process started for cluster 587 with 160 probes
2026-06-03 04:53:01,323 - cnv_pipe.batch.run_model.cluster587 - INFO - Child process finished cluster 587. Wrote cluster_587_samples.csv and cluster_587_params.csv
2026-06-03 04:53:01,326 - cnv_pipe.batch.run_model - INFO - Cluster 587 finished in 176.46 seconds. Status: SUCCESS