mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-aka42ufy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:01,415 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:02,203 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:02,372 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:24,346 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:24,545 - cnv_pipe.batch.run_model - INFO - Processing cluster 682 with 199 probes
2026-06-03 04:50:24,918 - cnv_pipe.batch.run_model.cluster682 - INFO - Child process started for cluster 682 with 199 probes
2026-06-03 04:54:03,319 - cnv_pipe.batch.run_model.cluster682 - INFO - Child process finished cluster 682. Wrote cluster_682_samples.csv and cluster_682_params.csv
2026-06-03 04:54:03,322 - cnv_pipe.batch.run_model - INFO - Cluster 682 finished in 218.78 seconds. Status: SUCCESS