mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nkhove8l because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:29,740 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:30,536 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:30,705 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:49:52,104 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:49:52,330 - cnv_pipe.batch.run_model - INFO - Processing cluster 514 with 176 probes
2026-06-03 04:49:52,704 - cnv_pipe.batch.run_model.cluster514 - INFO - Child process started for cluster 514 with 176 probes
2026-06-03 04:53:04,944 - cnv_pipe.batch.run_model.cluster514 - INFO - Child process finished cluster 514. Wrote cluster_514_samples.csv and cluster_514_params.csv
2026-06-03 04:53:04,947 - cnv_pipe.batch.run_model - INFO - Cluster 514 finished in 192.62 seconds. Status: SUCCESS