mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ae5hyjsv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:35,262 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:36,181 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:36,357 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:00,721 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:00,835 - cnv_pipe.batch.run_model - INFO - Processing cluster 859 with 198 probes
2026-06-03 04:51:01,458 - cnv_pipe.batch.run_model.cluster859 - INFO - Child process started for cluster 859 with 198 probes
2026-06-03 04:54:47,168 - cnv_pipe.batch.run_model.cluster859 - INFO - Child process finished cluster 859. Wrote cluster_859_samples.csv and cluster_859_params.csv
2026-06-03 04:54:47,171 - cnv_pipe.batch.run_model - INFO - Cluster 859 finished in 226.34 seconds. Status: SUCCESS