mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zduw9grg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:40,395 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:41,207 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:41,381 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:03,293 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:03,376 - cnv_pipe.batch.run_model - INFO - Processing cluster 573 with 187 probes
2026-06-03 04:50:03,868 - cnv_pipe.batch.run_model.cluster573 - INFO - Child process started for cluster 573 with 187 probes
2026-06-03 04:53:39,929 - cnv_pipe.batch.run_model.cluster573 - INFO - Child process finished cluster 573. Wrote cluster_573_samples.csv and cluster_573_params.csv
2026-06-03 04:53:39,933 - cnv_pipe.batch.run_model - INFO - Cluster 573 finished in 216.56 seconds. Status: SUCCESS