mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bfhai5wx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:27,579 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:28,367 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:28,532 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:49:50,078 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:49:50,296 - cnv_pipe.batch.run_model - INFO - Processing cluster 507 with 179 probes
2026-06-03 04:49:50,675 - cnv_pipe.batch.run_model.cluster507 - INFO - Child process started for cluster 507 with 179 probes
2026-06-03 04:53:03,919 - cnv_pipe.batch.run_model.cluster507 - INFO - Child process finished cluster 507. Wrote cluster_507_samples.csv and cluster_507_params.csv
2026-06-03 04:53:03,921 - cnv_pipe.batch.run_model - INFO - Cluster 507 finished in 193.62 seconds. Status: SUCCESS