File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/07fb53ac5ed04855eb78249edd1456/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-v8502d7f because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:29,362 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:30,238 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:30,419 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:53,902 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:53,992 - cnv_pipe.batch.run_model - INFO - Processing cluster 1150 with 200 probes
2026-06-03 04:51:54,403 - cnv_pipe.batch.run_model.cluster1150 - INFO - Child process started for cluster 1150 with 200 probes
2026-06-03 04:55:46,771 - cnv_pipe.batch.run_model.cluster1150 - INFO - Child process finished cluster 1150. Wrote cluster_1150_samples.csv and cluster_1150_params.csv
2026-06-03 04:55:46,774 - cnv_pipe.batch.run_model - INFO - Cluster 1150 finished in 232.78 seconds. Status: SUCCESS