mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i5a35ru0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:16,098 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:16,968 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:17,144 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:40,976 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:41,207 - cnv_pipe.batch.run_model - INFO - Processing cluster 754 with 183 probes
2026-06-03 04:50:41,598 - cnv_pipe.batch.run_model.cluster754 - INFO - Child process started for cluster 754 with 183 probes
2026-06-03 04:54:05,052 - cnv_pipe.batch.run_model.cluster754 - INFO - Child process finished cluster 754. Wrote cluster_754_samples.csv and cluster_754_params.csv
2026-06-03 04:54:05,055 - cnv_pipe.batch.run_model - INFO - Cluster 754 finished in 203.85 seconds. Status: SUCCESS