mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4yi4nlvp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:01,100 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:02,031 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:02,206 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:25,323 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:52:25,421 - cnv_pipe.batch.run_model - INFO - Processing cluster 1331 with 180 probes
2026-06-03 04:52:25,844 - cnv_pipe.batch.run_model.cluster1331 - INFO - Child process started for cluster 1331 with 180 probes
2026-06-03 04:55:53,768 - cnv_pipe.batch.run_model.cluster1331 - INFO - Child process finished cluster 1331. Wrote cluster_1331_samples.csv and cluster_1331_params.csv
2026-06-03 04:55:53,771 - cnv_pipe.batch.run_model - INFO - Cluster 1331 finished in 208.35 seconds. Status: SUCCESS