File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/5723b25b923fe57a47cc1ed59b9609/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tmr8nnia because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:23,649 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:24,742 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:24,952 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:51,377 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:51,680 - cnv_pipe.batch.run_model - INFO - Processing cluster 1102 with 197 probes
2026-06-03 04:51:52,166 - cnv_pipe.batch.run_model.cluster1102 - INFO - Child process started for cluster 1102 with 197 probes
2026-06-03 04:55:37,000 - cnv_pipe.batch.run_model.cluster1102 - INFO - Child process finished cluster 1102. Wrote cluster_1102_samples.csv and cluster_1102_params.csv
2026-06-03 04:55:37,003 - cnv_pipe.batch.run_model - INFO - Cluster 1102 finished in 225.32 seconds. Status: SUCCESS