mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qufsovij because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:44,283 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:45,071 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:45,237 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:06,214 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:06,412 - cnv_pipe.batch.run_model - INFO - Processing cluster 597 with 192 probes
2026-06-03 04:50:06,788 - cnv_pipe.batch.run_model.cluster597 - INFO - Child process started for cluster 597 with 192 probes
2026-06-03 04:53:25,396 - cnv_pipe.batch.run_model.cluster597 - INFO - Child process finished cluster 597. Wrote cluster_597_samples.csv and cluster_597_params.csv
2026-06-03 04:53:25,399 - cnv_pipe.batch.run_model - INFO - Cluster 597 finished in 198.99 seconds. Status: SUCCESS