mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8o20bqq_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:58,725 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:59,509 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:59,673 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:21,304 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:21,523 - cnv_pipe.batch.run_model - INFO - Processing cluster 669 with 161 probes
2026-06-03 04:50:21,901 - cnv_pipe.batch.run_model.cluster669 - INFO - Child process started for cluster 669 with 161 probes
2026-06-03 04:53:20,093 - cnv_pipe.batch.run_model.cluster669 - INFO - Child process finished cluster 669. Wrote cluster_669_samples.csv and cluster_669_params.csv
2026-06-03 04:53:20,095 - cnv_pipe.batch.run_model - INFO - Cluster 669 finished in 178.57 seconds. Status: SUCCESS