mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qngnia_p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:29,744 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:30,607 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:30,790 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:54,198 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:54,284 - cnv_pipe.batch.run_model - INFO - Processing cluster 832 with 190 probes
2026-06-03 04:50:54,703 - cnv_pipe.batch.run_model.cluster832 - INFO - Child process started for cluster 832 with 190 probes
2026-06-03 04:54:23,578 - cnv_pipe.batch.run_model.cluster832 - INFO - Child process finished cluster 832. Wrote cluster_832_samples.csv and cluster_832_params.csv
2026-06-03 04:54:23,580 - cnv_pipe.batch.run_model - INFO - Cluster 832 finished in 209.30 seconds. Status: SUCCESS