mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-e1hfdsg4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:21,332 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:22,256 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:22,437 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:46,113 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:46,328 - cnv_pipe.batch.run_model - INFO - Processing cluster 779 with 200 probes
2026-06-03 04:50:46,728 - cnv_pipe.batch.run_model.cluster779 - INFO - Child process started for cluster 779 with 200 probes
2026-06-03 04:54:21,301 - cnv_pipe.batch.run_model.cluster779 - INFO - Child process finished cluster 779. Wrote cluster_779_samples.csv and cluster_779_params.csv
2026-06-03 04:54:21,305 - cnv_pipe.batch.run_model - INFO - Cluster 779 finished in 214.98 seconds. Status: SUCCESS