mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-54bft6fn because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:56,551 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:57,335 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:57,502 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:18,856 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:19,063 - cnv_pipe.batch.run_model - INFO - Processing cluster 658 with 192 probes
2026-06-03 04:50:19,434 - cnv_pipe.batch.run_model.cluster658 - INFO - Child process started for cluster 658 with 192 probes
2026-06-03 04:53:49,449 - cnv_pipe.batch.run_model.cluster658 - INFO - Child process finished cluster 658. Wrote cluster_658_samples.csv and cluster_658_params.csv
2026-06-03 04:53:49,452 - cnv_pipe.batch.run_model - INFO - Cluster 658 finished in 210.39 seconds. Status: SUCCESS