mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1dha8krk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:52,453 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:53,240 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:53,407 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:14,815 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:15,051 - cnv_pipe.batch.run_model - INFO - Processing cluster 635 with 177 probes
2026-06-03 04:50:15,429 - cnv_pipe.batch.run_model.cluster635 - INFO - Child process started for cluster 635 with 177 probes
2026-06-03 04:53:31,732 - cnv_pipe.batch.run_model.cluster635 - INFO - Child process finished cluster 635. Wrote cluster_635_samples.csv and cluster_635_params.csv
2026-06-03 04:53:31,735 - cnv_pipe.batch.run_model - INFO - Cluster 635 finished in 196.68 seconds. Status: SUCCESS