mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ovm152ur because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:21,030 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:21,842 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:22,015 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:43,700 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:43,893 - cnv_pipe.batch.run_model - INFO - Processing cluster 782 with 117 probes
2026-06-03 04:50:44,261 - cnv_pipe.batch.run_model.cluster782 - INFO - Child process started for cluster 782 with 117 probes
2026-06-03 04:53:08,586 - cnv_pipe.batch.run_model.cluster782 - INFO - Child process finished cluster 782. Wrote cluster_782_samples.csv and cluster_782_params.csv
2026-06-03 04:53:08,589 - cnv_pipe.batch.run_model - INFO - Cluster 782 finished in 144.70 seconds. Status: SUCCESS