mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1cl_ncm6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:35,191 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:36,082 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:36,261 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:58,971 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:59,063 - cnv_pipe.batch.run_model - INFO - Processing cluster 860 with 129 probes
2026-06-03 04:50:59,602 - cnv_pipe.batch.run_model.cluster860 - INFO - Child process started for cluster 860 with 129 probes
2026-06-03 04:53:38,997 - cnv_pipe.batch.run_model.cluster860 - INFO - Child process finished cluster 860. Wrote cluster_860_samples.csv and cluster_860_params.csv
2026-06-03 04:53:38,999 - cnv_pipe.batch.run_model - INFO - Cluster 860 finished in 159.94 seconds. Status: SUCCESS