mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-szro1pbx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:49:50,086 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:49:50,872 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:49:51,037 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:12,571 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:12,786 - cnv_pipe.batch.run_model - INFO - Processing cluster 624 with 170 probes
2026-06-03 04:50:13,159 - cnv_pipe.batch.run_model.cluster624 - INFO - Child process started for cluster 624 with 170 probes
2026-06-03 04:53:25,227 - cnv_pipe.batch.run_model.cluster624 - INFO - Child process finished cluster 624. Wrote cluster_624_samples.csv and cluster_624_params.csv
2026-06-03 04:53:25,230 - cnv_pipe.batch.run_model - INFO - Cluster 624 finished in 192.44 seconds. Status: SUCCESS