mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-63by67h_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:22,426 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:23,288 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:23,454 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:44,539 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:50:44,737 - cnv_pipe.batch.run_model - INFO - Processing cluster 788 with 187 probes
2026-06-03 04:50:45,099 - cnv_pipe.batch.run_model.cluster788 - INFO - Child process started for cluster 788 with 187 probes
2026-06-03 04:54:09,825 - cnv_pipe.batch.run_model.cluster788 - INFO - Child process finished cluster 788. Wrote cluster_788_samples.csv and cluster_788_params.csv
2026-06-03 04:54:09,828 - cnv_pipe.batch.run_model - INFO - Cluster 788 finished in 205.09 seconds. Status: SUCCESS