mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nj1flm0y because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:05,430 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:06,297 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:06,472 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:28,716 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:52:28,800 - cnv_pipe.batch.run_model - INFO - Processing cluster 1357 with 189 probes
2026-06-03 04:52:29,202 - cnv_pipe.batch.run_model.cluster1357 - INFO - Child process started for cluster 1357 with 189 probes
2026-06-03 04:56:05,298 - cnv_pipe.batch.run_model.cluster1357 - INFO - Child process finished cluster 1357. Wrote cluster_1357_samples.csv and cluster_1357_params.csv
2026-06-03 04:56:05,300 - cnv_pipe.batch.run_model - INFO - Cluster 1357 finished in 216.50 seconds. Status: SUCCESS