mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0poy2ztp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:55,268 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:56,569 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:56,863 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:52:31,425 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:52:31,561 - cnv_pipe.batch.run_model - INFO - Processing cluster 1280 with 176 probes
2026-06-03 04:52:32,348 - cnv_pipe.batch.run_model.cluster1280 - INFO - Child process started for cluster 1280 with 176 probes
2026-06-03 04:57:00,878 - cnv_pipe.batch.run_model.cluster1280 - INFO - Child process finished cluster 1280. Wrote cluster_1280_samples.csv and cluster_1280_params.csv
2026-06-03 04:57:00,880 - cnv_pipe.batch.run_model - INFO - Cluster 1280 finished in 269.32 seconds. Status: SUCCESS