File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/069fce468648939e1d35870f50d758/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zicb1nxl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:51:32,586 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:51:33,441 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:51:33,621 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:51:56,744 - cnv_pipe.batch.run_model - INFO - Loaded data with 87 samples
2026-06-03 04:51:56,961 - cnv_pipe.batch.run_model - INFO - Processing cluster 1168 with 189 probes
2026-06-03 04:51:57,377 - cnv_pipe.batch.run_model.cluster1168 - INFO - Child process started for cluster 1168 with 189 probes
2026-06-03 04:55:32,233 - cnv_pipe.batch.run_model.cluster1168 - INFO - Child process finished cluster 1168. Wrote cluster_1168_samples.csv and cluster_1168_params.csv
2026-06-03 04:55:32,235 - cnv_pipe.batch.run_model - INFO - Cluster 1168 finished in 215.27 seconds. Status: SUCCESS