mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bobxaj_r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:43:46,719 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:43:47,903 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:43:48,116 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:44:06,442 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:44:06,567 - cnv_pipe.batch.run_model - INFO - Processing cluster 1186 with 178 probes
2026-06-03 04:44:07,335 - cnv_pipe.batch.run_model.cluster1186 - INFO - Child process started for cluster 1186 with 178 probes
2026-06-03 04:47:18,960 - cnv_pipe.batch.run_model.cluster1186 - INFO - Child process finished cluster 1186. Wrote cluster_1186_samples.csv and cluster_1186_params.csv
2026-06-03 04:47:18,963 - cnv_pipe.batch.run_model - INFO - Cluster 1186 finished in 192.40 seconds. Status: SUCCESS