mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xk0hl31s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:35,098 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:35,899 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:36,066 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:40:50,892 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:40:51,106 - cnv_pipe.batch.run_model - INFO - Processing cluster 109 with 182 probes
2026-06-03 04:40:51,512 - cnv_pipe.batch.run_model.cluster109 - INFO - Child process started for cluster 109 with 182 probes
2026-06-03 04:44:17,742 - cnv_pipe.batch.run_model.cluster109 - INFO - Child process finished cluster 109. Wrote cluster_109_samples.csv and cluster_109_params.csv
2026-06-03 04:44:17,744 - cnv_pipe.batch.run_model - INFO - Cluster 109 finished in 206.64 seconds. Status: SUCCESS