mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hcq7o7vm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:34,124 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:34,931 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:35,104 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:40:50,770 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:40:51,015 - cnv_pipe.batch.run_model - INFO - Processing cluster 94 with 185 probes
2026-06-03 04:40:51,392 - cnv_pipe.batch.run_model.cluster94 - INFO - Child process started for cluster 94 with 185 probes
2026-06-03 04:44:12,720 - cnv_pipe.batch.run_model.cluster94 - INFO - Child process finished cluster 94. Wrote cluster_94_samples.csv and cluster_94_params.csv
2026-06-03 04:44:12,723 - cnv_pipe.batch.run_model - INFO - Cluster 94 finished in 201.71 seconds. Status: SUCCESS