mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xba3aw2g because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:40:20,738 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:40:21,625 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:40:21,815 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:40:38,073 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:40:38,166 - cnv_pipe.batch.run_model - INFO - Processing cluster 114 with 174 probes
2026-06-03 04:40:38,615 - cnv_pipe.batch.run_model.cluster114 - INFO - Child process started for cluster 114 with 174 probes
2026-06-03 04:43:52,282 - cnv_pipe.batch.run_model.cluster114 - INFO - Child process finished cluster 114. Wrote cluster_114_samples.csv and cluster_114_params.csv
2026-06-03 04:43:52,285 - cnv_pipe.batch.run_model - INFO - Cluster 114 finished in 194.12 seconds. Status: SUCCESS