File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d0/b24c736ead05b427dc5367746572e7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hymig2pv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:44:28,192 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:44:29,007 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:44:29,189 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:44:45,042 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:44:45,245 - cnv_pipe.batch.run_model - INFO - Processing cluster 977 with 181 probes
2026-06-03 04:44:45,616 - cnv_pipe.batch.run_model.cluster977 - INFO - Child process started for cluster 977 with 181 probes
2026-06-03 04:48:15,831 - cnv_pipe.batch.run_model.cluster977 - INFO - Child process finished cluster 977. Wrote cluster_977_samples.csv and cluster_977_params.csv
2026-06-03 04:48:15,834 - cnv_pipe.batch.run_model - INFO - Cluster 977 finished in 210.59 seconds. Status: SUCCESS