File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/c407cf8d9a8341357f18941dca601b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4tnr7etn because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:43:57,556 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:43:58,365 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:43:58,541 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:44:13,826 - cnv_pipe.batch.run_model - INFO - Loaded data with 72 samples
2026-06-03 04:44:13,914 - cnv_pipe.batch.run_model - INFO - Processing cluster 911 with 192 probes
2026-06-03 04:44:14,374 - cnv_pipe.batch.run_model.cluster911 - INFO - Child process started for cluster 911 with 192 probes
2026-06-03 04:47:41,354 - cnv_pipe.batch.run_model.cluster911 - INFO - Child process finished cluster 911. Wrote cluster_911_samples.csv and cluster_911_params.csv
2026-06-03 04:47:41,357 - cnv_pipe.batch.run_model - INFO - Cluster 911 finished in 207.44 seconds. Status: SUCCESS