mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gdr4zxyx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:54:08,538 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:54:09,556 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:54:09,760 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:54:26,454 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:54:26,548 - cnv_pipe.batch.run_model - INFO - Processing cluster 1299 with 175 probes
2026-06-03 04:54:27,115 - cnv_pipe.batch.run_model.cluster1299 - INFO - Child process started for cluster 1299 with 175 probes
2026-06-03 04:57:32,428 - cnv_pipe.batch.run_model.cluster1299 - INFO - Child process finished cluster 1299. Wrote cluster_1299_samples.csv and cluster_1299_params.csv
2026-06-03 04:57:32,431 - cnv_pipe.batch.run_model - INFO - Cluster 1299 finished in 185.88 seconds. Status: SUCCESS