File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/2f376e6a522d126d9034af25bdd852/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lxrb7daq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:54:16,715 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:54:17,637 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:54:17,822 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:54:34,103 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:54:34,202 - cnv_pipe.batch.run_model - INFO - Processing cluster 1353 with 173 probes
2026-06-03 04:54:34,773 - cnv_pipe.batch.run_model.cluster1353 - INFO - Child process started for cluster 1353 with 173 probes
2026-06-03 04:57:38,851 - cnv_pipe.batch.run_model.cluster1353 - INFO - Child process finished cluster 1353. Wrote cluster_1353_samples.csv and cluster_1353_params.csv
2026-06-03 04:57:38,853 - cnv_pipe.batch.run_model - INFO - Cluster 1353 finished in 184.65 seconds. Status: SUCCESS