mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5tneyrha because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:50:12,418 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:50:13,245 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:50:13,423 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:50:28,810 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:50:29,034 - cnv_pipe.batch.run_model - INFO - Processing cluster 10 with 198 probes
2026-06-03 04:50:29,447 - cnv_pipe.batch.run_model.cluster10 - INFO - Child process started for cluster 10 with 198 probes
2026-06-03 04:53:41,999 - cnv_pipe.batch.run_model.cluster10 - INFO - Child process finished cluster 10. Wrote cluster_10_samples.csv and cluster_10_params.csv
2026-06-03 04:53:42,002 - cnv_pipe.batch.run_model - INFO - Cluster 10 finished in 192.97 seconds. Status: SUCCESS