mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-54opw2uu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:53:04,208 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:53:05,247 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:53:05,449 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:23,218 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:23,507 - cnv_pipe.batch.run_model - INFO - Processing cluster 964 with 142 probes
2026-06-03 04:53:23,985 - cnv_pipe.batch.run_model.cluster964 - INFO - Child process started for cluster 964 with 142 probes
2026-06-03 04:56:00,493 - cnv_pipe.batch.run_model.cluster964 - INFO - Child process finished cluster 964. Wrote cluster_964_samples.csv and cluster_964_params.csv
2026-06-03 04:56:00,495 - cnv_pipe.batch.run_model - INFO - Cluster 964 finished in 156.99 seconds. Status: SUCCESS