mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s_okaqrs because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:52,049 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:53,460 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:53,754 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:17,362 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:17,655 - cnv_pipe.batch.run_model - INFO - Processing cluster 876 with 191 probes
2026-06-03 04:53:18,305 - cnv_pipe.batch.run_model.cluster876 - INFO - Child process started for cluster 876 with 191 probes
2026-06-03 04:58:18,780 - cnv_pipe.batch.run_model.cluster876 - INFO - Child process finished cluster 876. Wrote cluster_876_samples.csv and cluster_876_params.csv
2026-06-03 04:58:18,784 - cnv_pipe.batch.run_model - INFO - Cluster 876 finished in 301.13 seconds. Status: SUCCESS