mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oi2wruyd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:53:08,834 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:53:10,267 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:53:10,527 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:32,703 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:33,033 - cnv_pipe.batch.run_model - INFO - Processing cluster 975 with 199 probes
2026-06-03 04:53:33,687 - cnv_pipe.batch.run_model.cluster975 - INFO - Child process started for cluster 975 with 199 probes
2026-06-03 04:57:45,895 - cnv_pipe.batch.run_model.cluster975 - INFO - Child process finished cluster 975. Wrote cluster_975_samples.csv and cluster_975_params.csv
2026-06-03 04:57:45,899 - cnv_pipe.batch.run_model - INFO - Cluster 975 finished in 252.87 seconds. Status: SUCCESS