mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mgdp2ujq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:53:05,881 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:53:06,968 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:53:07,180 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:25,593 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:25,890 - cnv_pipe.batch.run_model - INFO - Processing cluster 973 with 199 probes
2026-06-03 04:53:26,372 - cnv_pipe.batch.run_model.cluster973 - INFO - Child process started for cluster 973 with 199 probes
2026-06-03 04:56:50,400 - cnv_pipe.batch.run_model.cluster973 - INFO - Child process finished cluster 973. Wrote cluster_973_samples.csv and cluster_973_params.csv
2026-06-03 04:56:50,403 - cnv_pipe.batch.run_model - INFO - Cluster 973 finished in 204.51 seconds. Status: SUCCESS