mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-__evga3r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:54,166 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:55,014 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:55,205 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:10,742 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:10,966 - cnv_pipe.batch.run_model - INFO - Processing cluster 917 with 181 probes
2026-06-03 04:53:11,389 - cnv_pipe.batch.run_model.cluster917 - INFO - Child process started for cluster 917 with 181 probes
2026-06-03 04:56:24,473 - cnv_pipe.batch.run_model.cluster917 - INFO - Child process finished cluster 917. Wrote cluster_917_samples.csv and cluster_917_params.csv
2026-06-03 04:56:24,475 - cnv_pipe.batch.run_model - INFO - Cluster 917 finished in 193.51 seconds. Status: SUCCESS