mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3aq9m1a_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:54:05,740 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:54:06,678 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:54:06,869 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:54:23,079 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:54:23,314 - cnv_pipe.batch.run_model - INFO - Processing cluster 1287 with 155 probes
2026-06-03 04:54:23,734 - cnv_pipe.batch.run_model.cluster1287 - INFO - Child process started for cluster 1287 with 155 probes
2026-06-03 04:57:19,822 - cnv_pipe.batch.run_model.cluster1287 - INFO - Child process finished cluster 1287. Wrote cluster_1287_samples.csv and cluster_1287_params.csv
2026-06-03 04:57:19,825 - cnv_pipe.batch.run_model - INFO - Cluster 1287 finished in 176.51 seconds. Status: SUCCESS