mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wyz208e7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:53:27,401 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:53:28,443 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:53:28,635 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:46,243 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:46,364 - cnv_pipe.batch.run_model - INFO - Processing cluster 1087 with 143 probes
2026-06-03 04:53:47,045 - cnv_pipe.batch.run_model.cluster1087 - INFO - Child process started for cluster 1087 with 143 probes
2026-06-03 04:56:15,850 - cnv_pipe.batch.run_model.cluster1087 - INFO - Child process finished cluster 1087. Wrote cluster_1087_samples.csv and cluster_1087_params.csv
2026-06-03 04:56:15,852 - cnv_pipe.batch.run_model - INFO - Cluster 1087 finished in 149.49 seconds. Status: SUCCESS