mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pueg59bl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:53:07,235 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:53:08,182 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:53:08,365 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:24,462 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:24,679 - cnv_pipe.batch.run_model - INFO - Processing cluster 989 with 179 probes
2026-06-03 04:53:25,129 - cnv_pipe.batch.run_model.cluster989 - INFO - Child process started for cluster 989 with 179 probes
2026-06-03 04:56:32,468 - cnv_pipe.batch.run_model.cluster989 - INFO - Child process finished cluster 989. Wrote cluster_989_samples.csv and cluster_989_params.csv
2026-06-03 04:56:32,470 - cnv_pipe.batch.run_model - INFO - Cluster 989 finished in 187.79 seconds. Status: SUCCESS