mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6xj4d6ml because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:52:48,117 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:52:49,818 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:52:50,175 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:17,969 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:18,313 - cnv_pipe.batch.run_model - INFO - Processing cluster 845 with 177 probes
2026-06-03 04:53:19,075 - cnv_pipe.batch.run_model.cluster845 - INFO - Child process started for cluster 845 with 177 probes
2026-06-03 04:57:57,896 - cnv_pipe.batch.run_model.cluster845 - INFO - Child process finished cluster 845. Wrote cluster_845_samples.csv and cluster_845_params.csv
2026-06-03 04:57:57,900 - cnv_pipe.batch.run_model - INFO - Cluster 845 finished in 279.59 seconds. Status: SUCCESS