mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_v3jlri6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:53:07,336 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:53:08,326 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:53:08,527 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:25,439 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:25,712 - cnv_pipe.batch.run_model - INFO - Processing cluster 985 with 145 probes
2026-06-03 04:53:26,159 - cnv_pipe.batch.run_model.cluster985 - INFO - Child process started for cluster 985 with 145 probes
2026-06-03 04:56:06,010 - cnv_pipe.batch.run_model.cluster985 - INFO - Child process finished cluster 985. Wrote cluster_985_samples.csv and cluster_985_params.csv
2026-06-03 04:56:06,012 - cnv_pipe.batch.run_model - INFO - Cluster 985 finished in 160.30 seconds. Status: SUCCESS