mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gsmbc_ir because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 04:53:33,815 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 04:53:34,781 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 04:53:34,987 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 04:53:52,173 - cnv_pipe.batch.run_model - INFO - Loaded data with 65 samples
2026-06-03 04:53:52,433 - cnv_pipe.batch.run_model - INFO - Processing cluster 1125 with 194 probes
2026-06-03 04:53:52,896 - cnv_pipe.batch.run_model.cluster1125 - INFO - Child process started for cluster 1125 with 194 probes
2026-06-03 04:57:18,728 - cnv_pipe.batch.run_model.cluster1125 - INFO - Child process finished cluster 1125. Wrote cluster_1125_samples.csv and cluster_1125_params.csv
2026-06-03 04:57:18,731 - cnv_pipe.batch.run_model - INFO - Cluster 1125 finished in 206.30 seconds. Status: SUCCESS